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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H2BD, histone cluster 1, H2bd
Sequence ID:NM_021063
NM_138720
Entrez Gene ID:3017
Ensembl ID:ENSG00000158373

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 26158373 - 26171576

 Exon Info From UCSC:
NM_021063
NM_138720

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3659807Full LengthBC002842histone cluster 1, H2bd
40002354Full LengthBC096122histone cluster 1, H2bd

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_619790  NP_066407  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021063 NP_066407 P58876 Histone
NM_138720 NP_619790 P58876 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC002842 AAH02842 P58876
BC096122 AAH96122 P62807
AK292712 BAF85401 A8K9J7
AJ223353 CAA11277 P58876

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H2BD NP_066407 M.musculus Hist1h2bm 319186 Gene Info NP_835507 100
R.norvegicus Hist1h2bm 361247   NP_001101884 99
A.thaliana AT2G28720 817421   NP_180440 72
A.thaliana HTB2 832352   NP_197679 70
A.thaliana HTB4 836113   NP_200799 70
A.thaliana HTB1 837293   NP_172258 70
A.thaliana HTB11 823746   NP_190189 69
A.thaliana HTB9 823741   NP_190184 69
P.falciparum PF11_0062 810614   XP_001347738 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)