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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HIST1H4H, histone cluster 1, H4h
Sequence ID:NM_003543
Entrez Gene ID:8365
Ensembl ID:ENSG00000158406

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone marrow, brain, cerebrum, embryonic tissue, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, peripheral nervous system, placenta, pooled tissue, prostate, skin, stem cell, thymus, uncharacterized tissue, uterus
  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 26285354 - 26285727

NM_003543 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13742628535326285726

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40115073Full LengthBC120939histone cluster 1, H4h
40115074Full LengthBC120940histone cluster 1, H4h

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003534  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003543 NP_003534 P62805 Histone

Related Sequences

 
mRNAGenPeptSwissProt
BC120939 AAI20940 P62805
DQ892790 ABM83716  
DQ896037 ABM87036  
CR542169 CAG46966 P62805
CR542187 CAG46984 P62805

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HIST1H4H NP_003534 H.sapiens HIST1H4E 8367 Gene Info NP_003536 100
H.sapiens HIST4H4 121504 Gene Info NP_778224 100
H.sapiens HIST1H4K 8362 Gene Info NP_003532 100
H.sapiens HIST1H4I 8294 Gene Info NP_003486 100
H.sapiens HIST1H4A 8359 Gene Info NP_003529 100
H.sapiens HIST1H4L 8368 Gene Info NP_003537 100
H.sapiens HIST2H4B 554313 Gene Info NP_001029249 100
H.sapiens HIST2H4A 8370 Gene Info NP_003539 100
H.sapiens HIST1H4J 8363 Gene Info NP_068803 100
H.sapiens HIST1H4B 8366 Gene Info NP_003535 100
H.sapiens HIST1H4C 8364 Gene Info NP_003533 100
H.sapiens HIST1H4D 8360 Gene Info NP_003530 100
H.sapiens HIST1H4F 8361 Gene Info NP_003531 100
R.norvegicus LOC679840 679840   XP_001054684 100
A.gambiae AgaP_AGAP003909 1278748   XP_318361 99
A.gambiae AgaP_AGAP005023 1275847   XP_315129 99
A.gambiae AgaP_AGAP012586 1267447   XP_306004 99
A.gambiae AgaP_AGAP010724 1272526   XP_311439 99
A.gambiae AgaP_AGAP012574 1269026   XP_307607 99
A.gambiae AgaP_AGAP012885 1268267   XP_306825 99
A.gambiae AgaP_AGAP005026 1269019   XP_307600 99
A.gambiae AgaP_AGAP012558 1267440   XP_305995 99
C.elegans his-31 191677   NP_501406 99
C.elegans his-64 178066   NP_502154 99
C.elegans his-14 175027   NP_496889 99
C.elegans his-28 179264   NP_505291 99
C.elegans his-18 179267   NP_505298 99
C.elegans his-67 188792   NP_492641 99
C.elegans his-60 177522   NP_501203 99
C.elegans his-46 178050   NP_502133 99
C.elegans his-10 191671   NP_496893 99
C.elegans his-5 179233   NP_505200 99
C.elegans his-56 178055   NP_502139 99
C.elegans his-1 191667   NP_507034 99
C.elegans his-50 179260   NP_505275 99
C.elegans his-26 175032   NP_496896 99
C.elegans his-37 179341   NP_505466 99
C.elegans his-38 191680   NP_509231 99
D.melanogaster His4:CG33875 3771941   NP_001027367 99
D.melanogaster His4:CG33891 3772519   NP_001027327 99
D.melanogaster His4r 41773   NP_524352 99
D.melanogaster His4:CG33903 3772254   NP_001027297 99
D.melanogaster His4:CG33883 3771947   NP_001027347 99
D.melanogaster His4:CG33893 3772314   NP_001027322 99
D.melanogaster His4:CG33871 3772708   NP_001027377 99
D.melanogaster His4:CG33905 3771908   NP_001027293 99
D.melanogaster His4:CG33909 3771893   NP_001027284 99
D.melanogaster His4:CG33887 3772509   NP_001027337 99
D.melanogaster His4:CG33899 3771938   NP_001027307 99
D.melanogaster His4:CG33901 3771935   NP_001027302 99
D.melanogaster His4:CG33897 3772096   NP_001027312 99
D.melanogaster His4:CG33889 3772317   NP_001027332 99
D.melanogaster His4:CG33873 3772113   NP_001027372 99
D.melanogaster His4:CG33895 3772325   NP_001027317 99
D.melanogaster His4:CG33907 3772666   NP_001027288 99
D.melanogaster His4:CG31611 318846   NP_724344 99
D.melanogaster His4:CG33885 3772172   NP_001027342 99
A.thaliana AT3G53730 824540   NP_190941 98
A.thaliana AT5G59690 836090   NP_568911 98
A.thaliana AT3G46320 823777   NP_850660 98
A.thaliana AT1G07660 837279   NP_563793 98
A.thaliana AT3G45930 823736   NP_190179 98
A.thaliana AT5G59970 836119   NP_568918 98
A.thaliana AT1G07820 837297   NP_563797 98
A.thaliana HIS4 817423   NP_180441 98
P.falciparum PF11_0061 810613   XP_001347737 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)