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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOMER1, homer homolog 1 (Drosophila)
Sequence ID:NM_004272
Entrez Gene ID:9456
Ensembl ID:ENSG00000152413

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q14.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 78671744 - 78752842

NM_004272 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1622497866978678672019
225023307869264578692725
233124417869334978693459
244225987869772178697877
259927387873483278734971
273928317874287578742967
283229637874681278746943
296431207875268478752840
312142287880859278809699

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3904242Full LengthBC015502homer homolog 1 (Drosophila)
5294849Full LengthBC047438homer homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004263  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004272 NP_004263 Q86YM7 WH1

Related Sequences

 
mRNAGenPeptSwissProt
AF093262 AAC71026 Q86YM7
BC015502 AAH15502 Q86YM7
BC047438 AAH47438 Q5U5K4
AY189939 AAO38999 Q86YM7
AY189940 AAO39000 Q86YM6
AY189941 AAO39001 Q86YM7
BT009846 AAP88848 Q86YM7
DQ891278 ABM82204  
DQ894466 ABM85392  
AK223471 BAD97191 Q53F18
AK312481 BAG35385 Q86YM7
Y17829 CAA76877 Q86YM7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOMER1 NP_004263 M.musculus Homer1 26556 Gene Info NP_671705 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)