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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MKRN2, Makorin ring finger protein 2
Sequence ID:NM_014160
Entrez Gene ID:23609
Ensembl ID:ENSG00000075975

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 12598598 - 12625208

NM_014160 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1821259859312598674
832111261037312610501
2123931261156912611750
3946981261356712613871
6999131261629012616504
91410241261812912618239
102511691262330612623450
117027631262361412625207

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3916199Full LengthBC015715makorin ring finger protein 2
3354600IncompleteBC001799makorin ring finger protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_054879  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271707 NP_001258636    
NM_014160 NP_054879 Q9H000 zf-CCCH

Related Sequences

 
mRNAGenPeptSwissProt
AF302084 AAG30426 Q9H000
BC001799 AAH01799 Q9H000
BC015715 AAH15715 Q9H000
DQ891095 ABM82021  
DQ894277 ABM85203  
AK091318 BAG52337 Q9H000
AK298463 BAG60676 B4DPR4
AL834512 CAD39168 Q9H000

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MKRN2 NP_054879 R.norvegicus Mkrn2 297525   NP_001008315 89
M.musculus Mkrn2 67027 Gene Info NP_075779 88
A.thaliana AT3G08505 819998   NP_850540 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)