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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. POU1F1, POU class 1 homeobox 1
Sequence ID:NM_000306
NM_001122757
RefSeqGene ID:NG_008225
Entrez Gene ID:5449
Ensembl ID:ENSG00000064835

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PITUITARY HORMONE DEFICIENCY, COMBINED, 1 

Cytogenetic Location (from UniGene)

Cytogenetic Location:3p11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 87308782 - 87325737

 Exon Info From UCSC:
NM_000306
NM_001122757

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016074BC152851POU class 1 homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000297  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000306 NP_000297 P28069 Homeobox
Pou
NM_001122757 NP_001116229    

Related Sequences

 
mRNAGenPeptSwissProt
L18781 AAA60093 P28069
S73501 AAB31227 Q16223
BC152851 AAI52852  
D10216 BAA01068 P28069
X62429 CAA44295 P28069
X72215 CAA51017 P28069

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens POU1F1 NP_001116229 M.musculus Pou1f1 18736 Gene Info NP_032875 96
R.norvegicus Pou1f1 25517   NP_037140 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)