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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BARD1, BRCA1 associated RING domain 1
Sequence ID:NM_000465
RefSeqGene ID:NG_012047
Entrez Gene ID:580
Ensembl ID:ENSG00000138376

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BREAST CANCERAKT1
ATM
BRCA1
BRCA2
BRIP1
CASP8
CDH1
CHEK2
CHEK2
HMMR
KRAS
NQO2
NQO2
PALB2
PHB
PIK3CA
PIK3CA
PPM1D
RAD51
RAD54L
RB1CC1
SLC22A18
TP53
TP53
TSG101
XRCC3
XRCC3

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q34-q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 215593293 - 215674428

 Exon Info From UCSC:
NM_000465

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992142Full LengthBC126426BRCA1 associated RING domain 1
8992144Full LengthBC126428BRCA1 associated RING domain 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000456  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000465 NP_000456 Q99728 Ank
BRCT

Related Sequences

 
mRNAGenPeptSwissProt
U76638 AAB38316 Q99728
BC126426 AAI26427 Q99728
BC126428 AAI26429 A0AVN2
JF790280 AEF57471 F6MDH7
JF790281 AEF57472 F6MDH8
JF790282 AEF57473 F6MDH9
JF790283 AEF57474 F6MDI0
JF790284 AEF57475 F6MDI1
JF790285 AEF57476 F6MDI2
JF790286 AEF57477 F6MDI3
JF790287 AEF57478 F6MDI4
AK223409 BAD97129 Q53F80
AK314260 BAG36925 B2RAM8
AK301843 BAG63286 B4DX74
AX794378 CAE48237 Q99728

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BARD1 NP_000456 M.musculus Bard1 12021 Gene Info NP_031551 71
R.norvegicus Bard1 64557   NP_072144 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta