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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. TRIP12, Thyroid hormone receptor interactor 12
Sequence ID:NM_004238
Entrez Gene ID:9320
Ensembl ID:ENSG00000153827

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q36.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 230693072 - 230696880

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40083155Full LengthBC113891thyroid hormone receptor interactor 12
40083165Full LengthBC114556thyroid hormone receptor interactor 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004229  

Protein Infomation

NM_004238 NP_004229 Q14669 HECT

Related Sequences

L40383 AAC41731 Q14669
BC113891 AAI13892 Q14669
BC114556 AAI14557 Q14669
EU489742 ACC99349 Q14669
D28476 BAA05837 Q14669
AK302468 BAG63758 B4DYJ6
XM_001726042 XP_001726094  
XM_001732817 XP_001732869  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens TRIP12 NP_004229 R.norvegicus Trip12 316575   NP_001026829 99
M.musculus Trip12 14897 Gene Info NP_598736 98
A.thaliana KAK 830017   NP_849567 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)