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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HOXD4, homeobox D4
Sequence ID:NM_014621
RefSeqGene ID:NG_012080
Entrez Gene ID:3233
Ensembl ID:ENSG00000170166

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 177017023 - 177018205

NM_014621 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1682177016112177016793
6831294177017335177017946

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4068219Full LengthBC016763homeobox D4
30915295Full LengthBC074797homeobox D4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055436  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014621 NP_055436 P09016 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC016763 AAH16763 P09016
BC074797 AAH74797 P09016
AK313885 BAG36610 P09016
X04706 CAA28411 P09016

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HOXD4 NP_055436 R.norvegicus Hoxd4 288153   NP_001099355 95
M.musculus Hoxd4 15436 Gene Info NP_034599 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)