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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC11A1, solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
Sequence ID:NM_000578
NM_001032220
RefSeqGene ID:NG_012128
Entrez Gene ID:6556
Ensembl ID:ENSG00000018280

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BURULI ULCER 
MYCOBACTERIUM TUBERCULOSISCCL2
CD209
CISH
CTSZ
IFNG
IFNGR1
IRGM
IRGM
MC3R
SP110
TIRAP

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 219247010 - 219251813


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5756382Full LengthBC071165solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1
5212319IncompleteBC033754solute carrier family 11 (proton-coupled divalent metal ion transporters), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000569  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000578 NP_000569 P49279 Nramp

Related Sequences

 
mRNAGenPeptSwissProt
L32185 AAA57521 P49279
BC071165 AAH71165 C0H5Y3
D38171 BAA07370 P49279
D50402 BAA08907 P49279
D50403 BAA08908 P49279
AB209650 BAD92887 Q59F11
AK294707 BAG57862 Q9HBK0
AK298667 BAG60835 B4DQ73
AK303398 BAG64454 B4E0J2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC11A1 NP_000569 M.musculus Slc11a1 18173 Gene Info NP_038640 88
R.norvegicus Slc11a1 316519   NP_001026828 87
A.thaliana NRAMP5 827613   NP_193614 48
S.cerevisiae SMF3 850721   NP_013134 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)