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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RAB6A, RAB6A, member RAS oncogene family
Sequence ID:NM_001243718
NM_001243719
NM_002869
NM_198896
RefSeqGene ID:NG_029821
Entrez Gene ID:5870
Ensembl ID:ENSG00000175582

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 73429917 - 73441866

 Exon Info From UCSC:
NM_002869
NM_198896

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3506585Full LengthBC003617RAB6A, member RAS oncogene family
5295149Full LengthBC096818RAB6A, member RAS oncogene family
30342562Full LengthBC068486RAB6A, member RAS oncogene family
4824086IncompleteBC034996RAB6A, member RAS oncogene family
5752233IncompleteBC044241RAB6A, member RAS oncogene family

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115520  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001243718 NP_001230647    
NM_001243719 NP_001230648    
NM_002869 NP_002860   Ras
Miro
NM_032144 NP_115520 Q9H0N0 Ras
NM_198896 NP_942599 P20340 Ras

Related Sequences

 
mRNAGenPeptSwissProt
M28212 AAA60246 P20340
AF130986 AAD25535 P20340
AF130122 AAD27707 P20340
AF091030 AAF00043 Q9UL30
AF119836 AAF23593 P20340
AF198616 AAF73841 P20340
BC003617 AAH03617 P20340
BC068486 AAH68486 P20340
BC096818 AAH96818 P20340
BC120999 AAI21000 Q9H0N0
AF498939 AAM21087 P20340
AF498941 AAM21089 P20340
AF309646 AAN39685 Q9H0N0
BT019698 AAV38504 P20340
DQ437503 ABD93919 Q1W5D8
EU832786 ACE87797  
GQ129261 ACT64395  
AK057157 BAB71371 P20340
AK223551 BAD97271 Q53ET8
AK289748 BAF82437 P20340
AK290132 BAF82821 P20340
AK299639 BAH13085 B7Z5Z9
AK301534 BAH13508 B7Z772
AL136727 CAB66661 Q9H0N0
CR533469 CAG38500 Q9H0N0
CR541984 CAG46781 Q6FGX3
AM392935 CAL37813  
AM393579 CAL38456  
AM393731 CAL38606  
AM393804 CAL38679  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RAB6A NP_002860 M.musculus Rab6a 19346 Gene Info NP_001157135 99
R.norvegicus Rab6a 84379   NP_445818 99
A.gambiae AgaP_AGAP011363 4577653   XP_001238010 87
D.melanogaster Rab6 34636   NP_477172 86
C.elegans rab-6.2 181759   NP_510790 80
A.thaliana RABH1e 830890   NP_196588 74
A.thaliana RABH1d 816761   NP_179816 72
A.thaliana RABH1c 830148   NP_195699 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta