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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTCH2, patched 2
Sequence ID:NM_001166292
NM_003738
RefSeqGene ID:NG_013369
Entrez Gene ID:8643
Ensembl ID:ENSG00000117425

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
BASAL CELL CARCINOMA, SOMATICPTCH1
RASA1
MEDULLOBLASTOMAABR
APC
APC
BRCA2
CTNNB1
DMBT1
PTCH1
SUFU

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p34.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 45288086 - 45308604

 Exon Info From UCSC:
NM_001166292
NM_003738

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016143BC152911patched homolog 2 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003729  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166292 NP_001159764    
NM_003738 NP_003729 Q9Y6C5 Patched

Related Sequences

 
mRNAGenPeptSwissProt
AF091501 AAC79847 Q9Y6C5
AF119569 AAD17260 Q9Y6C5
AF087651 AAD25953 Q9Y6C5
BC152911 AAI52912  
AY358555 AAQ88919 Q9Y6C5
AY359016 AAQ89375 Q9Y6C5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTCH2 NP_003729 M.musculus Ptch2 19207 Gene Info NP_032984 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)