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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RNF2, ring finger protein 2
Sequence ID:NM_007212
Entrez Gene ID:6045
Ensembl ID:ENSG00000121481

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 185069522 - 185070189

NM_007212 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1231185014550185014780
232320185056683185056771
321481185060710185060870
482697185062192185062407
698970185067203185067475
9711142185068922185069093
11433551185069331185071739

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4285715Full LengthBC012583ring finger protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009143  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007212 NP_009143 Q99496 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
AF141327 AAD29717 Q99496
BC012583 AAH12583 Q99496
DQ892932 ABM83858  
DQ896181 ABM87180  
AK314793 BAG37324 Q99496
AK091574 BAG52383 B3KRH1
Y10571 CAA71596 Q99496

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RNF2 NP_009143 M.musculus Rnf2 19821 Gene Info NP_035407 100
R.norvegicus Rnf2 304850   NP_001020838 100
A.gambiae AgaP_AGAP002073 1281040   XP_320974 60
D.melanogaster Sce 43327   NP_477509 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)