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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. RBM8A, RNA binding motif protein 8A
Sequence ID:NM_005105
RefSeqGene ID:NG_032654
Entrez Gene ID:9939
Ensembl ID:ENSG00000131795

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 145507654 - 145511444

NM_005105 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3850355Full LengthBC017088RNA binding motif protein 8A
5269855IncompleteBC071577RNA binding motif protein 8A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005096  

Protein Infomation

NM_005105 NP_005096 Q9Y5S9 RRM_1

Related Sequences

AF127761 AAD21089 Q9Y5S9
AF161463 AAF29078 Q9Y5S9
AF198620 AAF37551 Q9Y5S9
AF182415 AAG14951 Q9Y5S9
AF231511 AAG16781 Q9Y5S9
AF299118 AAG27091 Q9Y5S9
BC017088 AAH17088 Q9Y5S9
BC017770 AAH17770 Q8WWE9
GQ129283 ACT64417  
GQ129284 ACT64418  
AK075009 BAG52051 Q9Y5S9
CR541805 CAG46604 Q9Y5S9
CR541823 CAG46622 Q9Y5S9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens RBM8A NP_005096 M.musculus Rbm8a 60365 Gene Info NP_001095877 100
R.norvegicus Rbm8a 295284   XP_215637 100
A.gambiae AgaP_AGAP006365 1276975   XP_316392 66
D.melanogaster tsu 35924   NP_610454 65
N.crassa NCU03226 3881475   XP_965326 64
C.elegans rnp-4 175572   NP_497891 59
A.thaliana Y14 841576   NP_564591 58
S.pombe SPAC23A1.09 2541998   NP_594439 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)