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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DDX20, DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
Sequence ID:NM_007204
Entrez Gene ID:11218
Ensembl ID:ENSG00000064703

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p21.1-p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 112298537 - 112309832

 Exon Info From UCSC:
NM_007204

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4651697Full LengthBC011556DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
4824324Full LengthBC034953DEAD (Asp-Glu-Ala-Asp) box polypeptide 20
5273709Full LengthBC031062DEAD (Asp-Glu-Ala-Asp) box polypeptide 20

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009135  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007204 NP_009135 Q9UHI6 EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF106019 AAD42744 Q9UHI6 EC 3.6.4.13
AF171063 AAF14544 Q9UHI6 EC 3.6.4.13
AY007146 AAG02003 Q9H4N4  
BC011556 AAH11556 Q9UHI6 EC 3.6.4.13
BC031062 AAH31062 Q8NEH0  
BC034953 AAH34953 Q8IYV2  
AF155803 AAK56799 Q8TDR3  
DQ892249 ABM83175    
DQ895449 ABM86375    
AK001506 BAA91727 Q9UHI6 EC 3.6.4.13
AK301697 BAG63169 B4DWV7  
AL133598 CAB63734 Q9UHI6 EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DDX20 NP_009135 R.norvegicus Ddx20 84473   XP_227558 84
M.musculus Ddx20 53975 Gene Info NP_059093 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta