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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DEFA4, defensin, alpha 4, corticostatin
Sequence ID:NM_001925
Entrez Gene ID:1669
Ensembl ID:ENSG00000164821

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 6793499 - 6795784

NM_001925 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
131967933446793662
32050367942496794432
50454267957476795785

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939804Full LengthBC093959defensin, alpha 4, corticostatin
8327559Full LengthBC112091defensin, alpha 4, corticostatin
40021796Full LengthBC106747defensin, alpha 4, corticostatin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001916  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001925 NP_001916 Q6EZF8
P12838
Defensin_1
Defensin_propep

Related Sequences

 
mRNAGenPeptSwissProt
BC093959 AAH93959 Q6EZF8
P12838
BC106747 AAI06748 Q6EZF8
P12838
BC112091 AAI12092 Q6EZF8
X65977 CAA46792 Q6EZF8
P12838

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)