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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LNP1, Leukemia NUP98 fusion partner 1
Sequence ID:NM_001085451
Entrez Gene ID:348801
Ensembl ID:ENSG00000206535

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 100120390 - 100175162

NM_001085451 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11247100120036100121282
12481436100148540100148728
14371667100170562100170792
16682216100174620100175168

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992078Full LengthBC126362leukemia NUP98 fusion partner 1
9052551Full LengthBC144031leukemia NUP98 fusion partner 1
40146511Full LengthBC130480leukemia NUP98 fusion partner 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001085451 NP_001078920 A1A4G5  

Related Sequences

 
mRNAGenPeptSwissProt
BC126362 AAI26363 A1A4G5
BC130480 AAI30481 A1A4G5
BC144031 AAI44032 A1A4G5
HQ258089 ADR82843  
AK056320 BAG51675 B3KPG3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LNP1 NP_001078920 R.norvegicus LOC100359918 100359918   XP_002727925 64
M.musculus Gm19797 100503609 Gene Info XP_003085152 63