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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COL6A6, collagen, type VI, alpha 6
Sequence ID:NM_001102608
Entrez Gene ID:131873
Ensembl ID:ENSG00000206384

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 130300859 - 130395888

 Exon Info From UCSC:
NM_001102608

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001102608 NP_001096078 A6NMZ7  

Related Sequences

 
mRNAGenPeptSwissProt
AL713792 CAH10639 A6NMZ7
AM774226 CAO81739 A6NMZ7
AM774227 CAO81740 A6NMZ7
AM774225 CAO81741 A6NMZ7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COL6A6 NP_001096078 R.norvegicus Col6a6 315979   XP_236593 84
M.musculus Col6a6 245026 Gene Info NP_001096077 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)