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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PITPNC1, Phosphatidylinositol transfer protein, cytoplasmic 1
Sequence ID:NM_181671
NM_012417
Entrez Gene ID:26207
Ensembl ID:ENSG00000154217

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 65374270 - 65689129

 Exon Info From UCSC:
NM_181671
NM_012417

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4299595Full LengthBC007905phosphatidylinositol transfer protein, cytoplasmic 1
6088874Full LengthBC067095phosphatidylinositol transfer protein, cytoplasmic 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036549  NP_858057  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012417 NP_036549   IP_trans
NM_181671 NP_858057   IP_trans

Related Sequences

 
mRNAGenPeptSwissProt
AF171102 AAF06148 Q9UKF7
BC007905 AAH07905 Q9UKF7
BC067095 AAH67095 Q9UKF7
AK290838 BAF83527 A8K473

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PITPNC1 NP_036549 R.norvegicus Pitpnc1 498015   XP_573213 96
M.musculus Pitpnc1 71795 Gene Info NP_665822 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)