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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COX11, cytochrome c oxidase assembly homolog 11 (yeast)
Sequence ID:NM_001162861
NM_001162862
NM_004375
NR_027941
NR_027942
Entrez Gene ID:1353
Ensembl ID:ENSG00000166260

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:17q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 53029264 - 53046014

 Exon Info From UCSC:
NM_001162861
NM_001162862
NM_004375

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4282744Full LengthBC005895COX11 homolog, cytochrome c oxidase assembly protein (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004366  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001162861 NP_001156333    
NM_001162862 NP_001156334    
NM_004375 NP_004366 Q9Y6N1 CtaG_Cox11

Related Sequences

 
mRNAGenPeptSwissProt
U79270 AAB50214 Q9Y6N1
AF044321 AAD08645 Q9Y6N1
BC005895 AAH05895 Q9Y6N1
DQ893136 ABM84062  
DQ896418 ABM87417  
AK293851 BAG57249 B4DEY8
AK295381 BAG58338 B4DI26
CR541837 CAG46636 Q9Y6N1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COX11 NP_004366 M.musculus Cox11 69802 Gene Info NP_950173 85
R.norvegicus Cox11 690300   NP_001103045 84
A.gambiae AgaP_AGAP010443 1272595   XP_311504 63
C.elegans JC8.5 186814   NP_502547 59
D.melanogaster CG31648 33776   NP_723086 59
A.thaliana AT1G02410 839364   NP_171743 55
P.falciparum PF14_0721 812303   XP_001348895 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)