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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTHLH, parathyroid hormone-like hormone
Sequence ID:NM_002820
NM_198964
NM_198965
NM_198966
RefSeqGene ID:NG_023197
Entrez Gene ID:5744
Ensembl ID:ENSG00000087494

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12p12.1-p11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 28116276 - 28122911

 Exon Info From UCSC:
NM_002820
NM_198964
NM_198965
NM_198966

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4050706Full LengthBC005961parathyroid hormone-like hormone

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_945316  NP_002811  NP_945315  NP_945317  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002820 NP_002811 Q53XY9 Parathyroid
NM_198964 NP_945315 Q53XY9 Parathyroid
NM_198965 NP_945316 P12272 Parathyroid
NM_198966 NP_945317 P12272 Parathyroid

Related Sequences

 
mRNAGenPeptSwissProt
J03580 AAA60216 P12272
M34071 AAA60217 P12272
J03802 AAA60218 P12272
Q53XY9
BC005961 AAH05961 P12272
Q53XY9
M26960 AAN76483  
M26958 AAO49791  
M26959 AAO49793  
BT007178 AAP35842 Q53XY9
DQ896393 ABM87392  
EU176428 ABW03879  
AK313476 BAG36261 Q53XY9
CR541882 CAG46680 P12272

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTHLH NP_945317 R.norvegicus Pthlh 24695   NP_036768 91
M.musculus Pthlh 19227 Gene Info NP_032996 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)