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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBR1, ubiquitin protein ligase E3 component n-recognin 1
Sequence ID:NM_174916
RefSeqGene ID:NG_012182
Entrez Gene ID:197131
Ensembl ID:ENSG00000159459

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
JOHANSON-BLIZZARD SYNDROME 

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 43307992 - 43328462

 Exon Info From UCSC:
NM_174916

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322557Full LengthBC113505ubiquitin protein ligase E3 component n-recognin 1
8322559Full LengthBC113507ubiquitin protein ligase E3 component n-recognin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_777576  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_174916 NP_777576 Q8IWV7 zf-UBR
ClpS

Related Sequences

 
mRNAGenPeptSwissProt
AF061556 AAC39845 Q8IWV7
BC113505 AAI13506 Q8IWV7
BC113507 AAI13508 Q8IWV7
AY061886 AAL32103 Q8IWV7
AF525401 AAO14997 Q8IWV7
AK027803 BAB55380 Q8IWV7
AK292516 BAF85205 A8K901
AK302489 BAG63774 B4DYL2
CR749326 CAH18181 Q8IWV7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBR1 NP_777576 M.musculus Ubr1 22222 Gene Info NP_033487 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)