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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MMP19, Matrix metallopeptidase 19
Sequence ID:NM_002429
Entrez Gene ID:4327
Ensembl ID:ENSG00000123342

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 56230209 - 56236757

NM_002429 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1019535622921456231157
195420815623133856231465
208222465623162656231790
224723755623238956232517
237626215623327956233524
262228375623445056234665
283829685623488956235019
296930545623613656236221
305532625623652756236734

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5761074Full LengthBC050368matrix metallopeptidase 19

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002420  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002429 NP_002420 Q99542 Hemopexin
Peptidase_M10
PG_binding_1

Related Sequences

 
mRNAGenPeptSwissProt
U38320 AAB63007 O15277
U38321 AAB63008 Q99542
U38322 AAB63009 Q99542
U37791 AAC51521 Q99542
U38431 AAC99995 Q99542
BC050368 AAH50368 Q99542
HQ448618 ADQ33096  
AK297999 BAG60305 B4DNP3
AK303202 BAG64292 B4E030
X92521 CAA63299 Q99542
Y08622 CAA69913 Q99542

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MMP19 NP_002420 R.norvegicus Mmp19 304608   NP_001100629 82
M.musculus Mmp19 58223 Gene Info NP_067387 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)