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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NIPA2, Non imprinted in Prader-Willi/Angelman syndrome 2
Sequence ID:NM_001184889
NM_030922
NM_001008860
NM_001184888
NM_001008892
NM_001008894
RefSeqGene ID:NG_021303
Entrez Gene ID:81614
Ensembl ID:ENSG00000140157

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 23005348 - 23034408

 Exon Info From UCSC:
NM_001184889
NM_030922
NM_001008860
NM_001184888
NM_001008892
NM_001008894

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3640970Full LengthBC011775non imprinted in Prader-Willi/Angelman syndrome 2
3451448IncompleteBC000957non imprinted in Prader-Willi/Angelman syndrome 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001008894  NP_001008860  NP_112184  NP_001008892  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008860 NP_001008860 Q8N8Q9 DUF803
NM_001008892 NP_001008892 Q8N8Q9 DUF803
NM_001008894 NP_001008894   DUF6
DUF803
NM_001184888 NP_001171817    
NM_001184889 NP_001171818    
NM_030922 NP_112184 Q8N8Q9 DUF803

Related Sequences

 
mRNAGenPeptSwissProt
BC000957 AAH00957 Q8N8Q9
BC011775 AAH11775 Q8N8Q9
AY732242 AAU34000 Q8N8Q9
JF432506 ADZ15723  
AK096305 BAC04757 Q8N8Q9
AK300843 BAG62494 F8W7Y8
BK001120 DAA01509 Q8N8Q9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NIPA2 NP_001008860 M.musculus Nipa2 93790 Gene Info NP_076136 96
R.norvegicus Nipa2 308667   NP_001100988 96
C.elegans Y53G8B.4 175418   NP_001122733 59
A.gambiae AgaP_AGAP009838 1279256   XP_318951 57
D.melanogaster spict 34681   NP_609586 52
A.thaliana AT1G71900 843521   NP_565027 51
A.thaliana AT1G34470 840349   NP_564447 50
A.thaliana AT4G09640 826550   NP_192702 50
N.crassa NCU00490 3872322   XP_956175 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)