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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. DDX52, DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Sequence ID:NM_007010
Entrez Gene ID:11056
Ensembl ID:ENSG00000141141

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 35973799 - 36003447

 Exon Info From UCSC:
NM_007010

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4808288Full LengthBC041785DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
3687438IncompleteBC006489DEAD (Asp-Glu-Ala-Asp) box polypeptide 52

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008941  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007010 NP_008941 Q9Y2R4 EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF077033 AAD27766 Q9Y2R4 EC 3.6.4.13
BC041785 AAH41785 Q9Y2R4 EC 3.6.4.13
AK001652 BAA91812 Q9Y2R4 EC 3.6.4.13
AB208938 BAD92175 Q59H21  
AK001245 BAG50877 B3KM65  
AK027425 BAG51319 B3KM65  
AJ010840 CAA09374 Q9Y2R4 EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DDX52 NP_008941 M.musculus Ddx52 78394 Gene Info NP_084372 89
R.norvegicus Ddx52 85432   NP_445977 88
D.melanogaster CG5589 39979   NP_649009 51
A.gambiae AgaP_AGAP012358 1280463   XP_001689233 50
A.thaliana AT3G09720 820129   NP_187583 45
S.cerevisiae ROK1 852704   NP_011344 45
C.elegans R05D11.4 172651   NP_492326 42
S.pombe rok1 2541786   NP_593033 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)