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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LDLRAP1, Low density lipoprotein receptor adaptor protein 1
Sequence ID:NM_015627
RefSeqGene ID:NG_008932
Entrez Gene ID:26119
Ensembl ID:ENSG00000157978

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
HYPERCHOLESTEROLEMIA, FAMILIAL, AUTOSOMAL RECESSIVE 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36-p35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 25879854 - 25895375

NM_015627 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12022587007525870276
2033452588041225880554
3464582588135025881462
4595732588364325883757
5746462588913425889206
6477302588956025889643
7318612589015125890281
8628962589166325891697
89729332589333825895374

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5197824Full LengthBC029770low density lipoprotein receptor adaptor protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056442  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015627 NP_056442 Q5SW96 PID

Related Sequences

 
mRNAGenPeptSwissProt
BC029770 AAH29770 Q5SW96
AK024397 BAB14908 Q9H7R8
AK091219 BAG52309 B3KR97
AL117654 CAB56030 Q5SW96

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LDLRAP1 NP_056442 M.musculus Ldlrap1 100017 Gene Info NP_663529 90
R.norvegicus Ldlrap1 500564   NP_001102741 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)