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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TOPORS, topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
Sequence ID:NM_001195622
NM_005802
RefSeqGene ID:NG_017050
Entrez Gene ID:10210
Ensembl ID:ENSG00000197579

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RETINITIS PIGMENTOSA 31 

Cytogenetic Location (from UniGene)

Cytogenetic Location:9p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 32540823 - 32552551

Transcript StartTranscript EndChromosomal Start Chromosomal End
1737983254054232544323
379939933255077132550965
399441843255243132552621

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30344728Full LengthBC060884topoisomerase I binding, arginine/serine-rich

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005793  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001195622 NP_001182551    
NM_005802 NP_005793 Q9NS56 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
U82939 AAC98530 Q9NS56
AF098300 AAD23379 Q9NS56
BC060884 AAH60884 Q9NS56
AB045732 BAB03714 Q9NS56
AB045733 BAB03715 Q9NS56

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TOPORS NP_005793 M.musculus Topors 106021 Gene Info NP_598858 87
R.norvegicus Topors 362501   NP_001102128 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)