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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCNA2, cyclin A2
Sequence ID:NM_001237
Entrez Gene ID:890
Ensembl ID:ENSG00000145386

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q27Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 122738722 - 122745069

NM_001237 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
151256122737599122738840
12571390122739198122739331
13911504122739954122740067
15051712122740526122740733
17131936122741696122741919
19372049122742133122742245
20502293122743557122743800
22942811122744570122745087

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143786Full LengthBC104783cyclin A2
8143790Full LengthBC104787cyclin A2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001228  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001237 NP_001228 P20248 Cyclin_N
Cyclin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC104783 AAI04784 P20248
BC104787 AAI04788 P20248
AK291931 BAF84620 P20248
X51688 CAA35986 P20248
CR407692 CAG28620 P20248

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCNA2 NP_001228 R.norvegicus Ccna2 114494   NP_446154 90
M.musculus Ccna2 12428 Gene Info NP_033958 89
A.gambiae AgaP_AGAP012413 1280302   XP_320142 56
D.melanogaster CycA 39340   NP_524030 50
A.thaliana CYCA3;2 841124   NP_564499 46
A.thaliana CYCA3;1 834324   NP_199122 46
A.thaliana CYCA3;3 841125   NP_175155 45
A.thaliana CYCA3;4 841126   NP_175156 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)