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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HMCN1, hemicentin 1
Sequence ID:NM_031935
RefSeqGene ID:NG_011841
Entrez Gene ID:83872
Ensembl ID:ENSG00000143341

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AGE-RELATED MACULOPATHYAPOE
C2
CFB
CFHR1
CFHR3
CX3CR1
PLEKHA1
PLEKHA1
TLR3

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.3-q31.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 185703682 - 186160079

 Exon Info From UCSC:
NM_031935

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9094351IncompleteBC172190hemicentin
9094353IncompleteBC172209hemicentin
9094360IncompleteBC172206hemicentin
9094363IncompleteBC172207hemicentin
9094365IncompleteBC172208hemicentin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031935 NP_114141 Q96RW7  

Related Sequences

 
mRNAGenPeptSwissProt
AF156100 AAK68690 Q96RW7
AK027344 BAB55049 Q96K89
AK056336 BAB71154 Q96RW7
AK056557 BAB71216 Q96RW7
AJ306906 CAC37630 Q96RW7
AL833232 CAH10605 Q69YJ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HMCN1 NP_114141 M.musculus Hmcn1 545370 Gene Info NP_001019891 87
R.norvegicus Hmcn1 289094   XP_222716 87
C.elegans him-4 181187   NP_001024582 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)