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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C10orf90, Chromosome 10 open reading frame 90
Sequence ID:NM_001004298
Entrez Gene ID:118611
Ensembl ID:ENSG00000154493

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10q26.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 128113565 - 128192687

NM_001004298 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
20915128113575128114470
9161015128114559128114658
10161079128118355128118418
10801257128147608128147785
12581442128149969128150153
14431733128153264128153554
17342862128192525128193653
28632954128202416128202507
29553097128209867128210009

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021766Full LengthBC140898chromosome 10 open reading frame 90
9056797Full LengthBC146869chromosome 10 open reading frame 90
100063616Full LengthBC156941chromosome 10 open reading frame 90
4871932IncompleteBC021140chromosome 10 open reading frame 90
100062378BC156058chromosome 10 open reading frame 90

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001004298 NP_001004298 Q96M02  

Related Sequences

 
mRNAGenPeptSwissProt
BC021140 AAH21140 Q96M02
BC140898 AAI40899 Q96M02
BC146869 AAI46870 Q96M02
BC156058 AAI56059  
BC156941 AAI56942  
AF435960 AAM20911 Q96M02
AK057500 BAB71512 Q96M02
AK297577 BAG59968 B4DMQ6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C10orf90 NP_001004298 M.musculus D7Ertd443e 71007 Gene Info NP_001074800 67
R.norvegicus LOC100302465 100302465   NP_001156686 67

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)