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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CHAC2, ChaC, cation transport regulator homolog 2 (E. coli)
Sequence ID:NM_001008708
Entrez Gene ID:494143
Ensembl ID:ENSG00000143942

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p16Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 53994985 - 53997635

NM_001008708 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12305399492853995157
2312665399904353999078
26712755400127854002286

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4045703Full LengthBC025376ChaC, cation transport regulator homolog 2 (E. coli)
4050858Full LengthBC019239ChaC, cation transport regulator homolog 2 (E. coli)
4282697Full LengthBC017941ChaC, cation transport regulator homolog 2 (E. coli)
6174351Full LengthBC053896ChaC, cation transport regulator homolog 2 (E. coli)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001008708  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008708 NP_001008708 Q8WUX2 ChaC

Related Sequences

 
mRNAGenPeptSwissProt
BC017941 AAH17941 Q8WUX2
BC019239 AAH19239 Q8WUX2
BC025376 AAH25376 Q8WUX2
BC053896 AAH53896 Q8WUX2
HQ447717 ADQ32202  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHAC2 NP_001008708 M.musculus Chac2 68044 Gene Info NP_080803 94
R.norvegicus Chac2 360994   NP_001020187 94
A.gambiae AgaP_AGAP002216 1269344   XP_307968 51
D.melanogaster CG2540 32216   NP_572818 50
A.thaliana AT1G44790 841043   NP_564490 47
N.crassa NCU02737 3881262   XP_965122 47
S.cerevisiae YER163C 856910   NP_011090 43
S.pombe SPBC31F10.03 2540372   NP_596565 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)