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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PROX1, prospero homeobox 1
Sequence ID:NM_001270616
NM_002763
Entrez Gene ID:5629
Ensembl ID:ENSG00000117707

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q41Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 214209623 - 214211865

Transcript StartTranscript EndChromosomal Start Chromosomal End
1205214161859214162063
2061997214169811214171602
19982105214178507214178614
21062300214184863214185057
23013069214208991214209759

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3532312Full LengthBC024201prospero homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002754  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270616 NP_001257545    
NM_002763 NP_002754 Q92786 Prox1

Related Sequences

 
mRNAGenPeptSwissProt
U44060 AAC50656 Q92786
BC024201 AAH24201 Q92786
EU446861 ABZ92390  
AK298182 BAG60453 B4DP41

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PROX1 NP_002754 M.musculus Prox1 19130 Gene Info NP_032963 98
R.norvegicus Prox1 305066   NP_001100671 98
C.elegans ceh-26 176137   NP_498760 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)