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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARHGEF38, Rho guanine nucleotide exchange factor (GEF) 38
Sequence ID:NM_001242729
NM_017700
Entrez Gene ID:54848
Ensembl ID:ENSG00000236699

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 106580353 - 106602070

Transcript StartTranscript EndChromosomal Start Chromosomal End
1342106473776106474117
343530106510404106510591
531654106534540106534663
6551436106552054106552835

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40023595Full LengthBC105695hypothetical protein FLJ20184

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001242729 NP_001229658    
NM_017700 NP_060170 Q9NXL2 RhoGEF

Related Sequences

 
mRNAGenPeptSwissProt
BC105695 AAI05696 Q9NXL2
AK000191 BAA90998 Q9NXL2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARHGEF38 NP_001229658 R.norvegicus RGD1311728 295449   XP_227688 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)