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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRSS42, Protease, serine, 42
Sequence ID:NM_182702
Entrez Gene ID:339906
Ensembl ID:ENSG00000178055

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 46871893 - 46875585

NM_182702 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2904687189446871982
912514687336546873525
2525114687443646874695
5126684687500946875165
6698824687537146875584

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014223BC140233testis serine protease 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_874361  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_182702 NP_874361 Q7Z5A4 Trypsin

Related Sequences

 
mRNAGenPeptSwissProt
BC140233 AAI40234  
AJ544583 CAD67566 Q7Z5A4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRSS42 NP_874361 R.norvegicus Prss42 301027   NP_001100333 59
M.musculus Prss42 235628 Gene Info NP_694739 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)