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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OTOL1, Otolin 1
Sequence ID:NM_001080440
Entrez Gene ID:131149
Ensembl ID:ENSG00000182447

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_001080440 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1364161214595161214958
365454161216958161217047
455517161220094161220156
5181432161220813161221727

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001080440 NP_001073909    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OTOL1 NP_001073909 R.norvegicus Otol1 295117   XP_227256 74
M.musculus Otol1 229389 Gene Info NP_001018041 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)