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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SNTG1, syntrophin, gamma 1
Sequence ID:NM_018967
Entrez Gene ID:54212
Ensembl ID:ENSG00000147481

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q11-q12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 50824596 - 51705427

 Exon Info From UCSC:
NM_018967

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8143832Full LengthBC104829syntrophin, gamma 1
30915592Full LengthBC075072syntrophin, gamma 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061840  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018967 NP_061840 Q9NSN8 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
BC075072 AAH75072 Q9NSN8
BC104829 AAI04830 Q9NSN8
AK314084 BAG36781 B2RA84
AL161971 CAB82311 Q9NSN8
AJ003030 CAB92968 Q9NSN8
AM393671 CAL38547  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNTG1 NP_061840 M.musculus Sntg1 71096 Gene Info NP_081947 94
R.norvegicus Sntg1 500394   XP_575753 90
A.gambiae AgaP_AGAP006633 1277220   XP_316665 42
D.melanogaster Syn2 36848   NP_725587 41
C.elegans stn-2 181029   NP_001024610 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)