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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ATL1, atlastin GTPase 1
Sequence ID:NM_001127713
NM_015915
NM_181598
RefSeqGene ID:NG_009028
Entrez Gene ID:51062
Ensembl ID:ENSG00000198513

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
NEUROPATHY, HEREDITARY SENSORY, TYPE ID 
SPASTIC PARAPLEGIA 3A, AUTOSOMAL DOMINANT 

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 51054749 - 51099391

 Exon Info From UCSC:
NM_001127713
NM_015915
NM_181598

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3869877Full LengthBC010708atlastin GTPase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056999  NP_853629  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001127713 NP_001121185    
NM_015915 NP_056999 Q8WXF7 GBP
NM_181598 NP_853629   GBP

Related Sequences

 
mRNAGenPeptSwissProt
AF131801 AAD20047 Q8WXF7
BC010708 AAH10708 Q8WXF7
AY032844 AAK51160 Q8WXF7
AF444143 AAL37898 Q8WXF7
AK223436 BAD97156 Q53F53
AK290185 BAF82874 Q8WXF7
CR457153 CAG33434 Q6IAK1
AL833591 CAH10392 Q69YH7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATL1 NP_056999 M.musculus Atl1 73991 Gene Info NP_848743 97
R.norvegicus Atl1 362750   NP_001009831 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)