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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PTGR1, prostaglandin reductase 1
Sequence ID:NM_001146108
NM_001146109
NM_012212
Entrez Gene ID:22949
Ensembl ID:ENSG00000106853

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q31.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 114311101 - 114313170

 Exon Info From UCSC:
NM_001146108
NM_001146109
NM_012212

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5122305Full LengthBC035228prostaglandin reductase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036344  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001146108 NP_001139580      
NM_001146109 NP_001139581      
NM_012212 NP_036344 Q14914 EC 1.3.1.74
EC 1.3.1.48
ADH_zinc_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC035228 AAH35228 Q14914 EC 1.3.1.74
EC 1.3.1.48
D49387 BAA08382 Q14914 EC 1.3.1.74
EC 1.3.1.48
AK289597 BAF82286 Q14914 EC 1.3.1.74
EC 1.3.1.48
AK298379 BAG60615 B4DPK3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTGR1 NP_001139580 R.norvegicus Ptgr1 192227   NP_620218 82
M.musculus Ptgr1 67103 Gene Info NP_080244 81
A.gambiae AgaP_AGAP000288 1271971   XP_310833 50
A.gambiae AgaP_AGAP000289 1271970   XP_310832 49
A.gambiae AgaP_AGAP000414 1271830   XP_310684 47
A.thaliana AT1G65560 842867   NP_176734 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)