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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLK3, CDC-like kinase 3
Sequence ID:NM_001130028
NM_003992
NM_001292
Entrez Gene ID:1198
Ensembl ID:ENSG00000179335

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 74911540 - 74922457

 Exon Info From UCSC:
NM_001130028
NM_003992

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3138580Full LengthBC002555CDC-like kinase 3
3957357Full LengthBC006103CDC-like kinase 3
5114635Full LengthBC019881CDC-like kinase 3

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001130028 NP_001123500 P49761 EC 2.7.12.1  
NM_003992 NP_003983      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L29220 AAA61483 P49761 EC 2.7.12.1
L29217 AAA61484 P49761 EC 2.7.12.1
BC002555 AAH02555 P49761 EC 2.7.12.1
BC006103 AAH06103 P49761 EC 2.7.12.1
BC019881 AAH19881 P49761 EC 2.7.12.1
BT006993 AAP35639 P49761 EC 2.7.12.1
JF432199 ADZ15416    
AB209535 BAD92772 Q59FC5  
AK291983 BAF84672 A8K7G8  
AK091692 BAG52400 B3KRI8  
AK096115 BAG53214 B3KTV2  
AK097982 BAG53559 B3KUU7  
AK122860 BAG53765 B3KVF3  
AK293769 BAG57185 B4DES4  
AK301689 BAG63161 B4DWU9  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLK3 NP_001123500 R.norvegicus Clk3 171305   NP_599167 99
M.musculus Clk3 102414 Gene Info NP_031739 88
A.gambiae AgaP_AGAP000847 1277360   XP_316817 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)