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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHRM5, cholinergic receptor, muscarinic 5
Sequence ID:NM_012125
Entrez Gene ID:1133
Ensembl ID:ENSG00000184984

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q26Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 34310427 - 34356931

NM_012125 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12633426108834261350
2645953433874034339071
59630393435484334357286

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5298446Full LengthBC041805cholinergic receptor, muscarinic 5
30339053Full LengthBC068528cholinergic receptor, muscarinic 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036257  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012125 NP_036257 P08912 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF026263 AAB95158 P08912
BC041805 AAH41805 Q8IVW0
BC068528 AAH68528 Q6NUM3
AF385591 AAK68116 P08912
AF498919 AAM18942 P08912
EU832806 ACE87817  
GQ129426 ACT64560  
JF432772 ADZ15989  
AB084282 BAB91222 P08912

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHRM5 NP_036257 M.musculus Chrm5 213788 Gene Info NP_991352 89
R.norvegicus Chrm5 53949   NP_059058 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)