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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PINX1, PIN2/TERF1 interacting, telomerase inhibitor 1
Sequence ID:NM_017884
Entrez Gene ID:54984
Ensembl ID:ENSG00000254093

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 10586823 - 10622667

NM_017884 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15431062288310623425
5446201067770210677778
6217131068366110683753
7147921068917410689252
7938851069040110690493
8869951069217510692284
99610471069724710697298

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3914396Full LengthBC015479PIN2-interacting protein 1
7939607Full LengthBC093762PIN2-interacting protein 1
5222470IncompleteBC043573PIN2-interacting protein 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017884 NP_060354 Q96BK5 G-patch

Related Sequences

 
mRNAGenPeptSwissProt
AF205718 AAG18009 Q96BK5
BC015479 AAH15479 Q96BK5
BC093762 AAH93762 Q96BK5
AF418553 AAN31333 Q96BK5
AY238941 AAP37006 Q96BK5
AY523566 AAS19507 Q96BK5
AK313715 BAG36458 Q96BK5
AJ344104 CAC51436 Q96BK5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PINX1 NP_060354 M.musculus Pinx1 72400 Gene Info NP_082504 74
R.norvegicus Pinx1 305963   NP_001076806 72
C.elegans T23G7.3 174456   NP_495955 38
D.melanogaster CG11180 37330   NP_611495 36
A.gambiae AgaP_AGAP008951 1279919   XP_319704 35
S.cerevisiae PXR1 853197   NP_011796 32
N.crassa NCU02528 3881857   XP_965659 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)