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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBL1XR1, Transducin (beta)-like 1 X-linked receptor 1
Sequence ID:NM_024665
Entrez Gene ID:79718
Ensembl ID:ENSG00000177565

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q26.32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 176743017 - 176743302

 Exon Info From UCSC:
NM_024665

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8322473Full LengthBC113421transducin (beta)-like 1 X-linked receptor 1
4358996IncompleteBC060320transducin (beta)-like 1 X-linked receptor 1
4754868IncompleteBC034712transducin (beta)-like 1X-linked receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_078941  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024665 NP_078941 Q9BZK7 WD40
LisH

Related Sequences

 
mRNAGenPeptSwissProt
AF267864 AAG44733 Q9H2I4
AF268193 AAG44736 Q9BZK7
BC048298 AAH48298 Q9H2I4
BC060320 AAH60320 Q9BZK7
BC113421 AAI13422 Q9BZK7
AF314544 AAK00301 Q9BZK7
HQ258622 ADR83374  
AK022956 BAB14331 Q9BZK7
AK296946 BAH12461 B7Z475

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBL1XR1 NP_078941 M.musculus Tbl1xr1 81004 Gene Info NP_109657 99
R.norvegicus Tbl1xr1 365755   NP_001102411 99
A.thaliana HOS15 836867   NP_201533 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)