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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CASQ2, calsequestrin 2 (cardiac muscle)
Sequence ID:NM_001232
RefSeqGene ID:NG_008802
Entrez Gene ID:845
Ensembl ID:ENSG00000118729

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
VENTRICULAR TACHYCARDIA, CATECHOLAMINERGIC POLYMORPHIC, 1RYR2
RYR2

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 116242619 - 116247870

 Exon Info From UCSC:
NM_001232

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4289141Full LengthBC022288calsequestrin 2 (cardiac muscle)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001223  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001232 NP_001223 O14958 Calsequestrin

Related Sequences

 
mRNAGenPeptSwissProt
BC022288 AAH22288 O14958
DQ893219 ABM84145  
DQ896548 ABM87547  
D55655 BAA23494 O14958
AK313041 BAG35873 O14958
AK293595 BAG57061 B4DEF0
AK295502 BAG58422 B4DIB0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CASQ2 NP_001223 R.norvegicus Casq2 29209   NP_058827 91
M.musculus Casq2 12373 Gene Info NP_033944 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)