Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SHPK, sedoheptulokinase
Sequence ID:NM_013276
Entrez Gene ID:23729
Ensembl ID:ENSG00000197417

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 3511555 - 3539616

NM_013276 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1271135115553514265
2712291235186303518830
2913308835245303524705
3089324135266323526784
3242342535273413527524
3426356735334983533639
3568383835393453539615

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4413491Full LengthBC020543sedoheptulokinase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_037408  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_013276 NP_037408     FGGY_N
NM_018727 NP_061197     Ank
Ion_trans
NM_080704 NP_542435 Q8NER1   Ank
Ion_trans
NM_080705 NP_542436     Ank
Ion_trans
NM_080706 NP_542437     Ank
Ion_trans

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF163573 AAF24936 Q9UHJ6 EC 2.7.1.14
AF196175 AAG43466 Q8NER1  
AF196176 AAG43467 Q8NER1  
BC020543 AAH20543 Q9UHJ6 EC 2.7.1.14
BC132820 AAI32821 Q8NER1  
BC136633 AAI36634 Q8NER1  
AY131289 AAM89472 Q8NER1  
AF235160 AAN73432 Q8IZY9  
AY986821 AAX84657 Q52PU4  
DQ177332 ABA06605 Q3LU47  
DQ177333 ABA06606 Q3LU46  
DQ898279 ABI58280 Q09HS5  
DQ891646 ABM82572    
DQ894835 ABM85761    
AK312428 BAG35337 Q9UHJ6 EC 2.7.1.14
AK055609 BAG51543 B3KP31  
AK298360 BAG60602 B4DPJ0  
AL136801 CAB66735 Q8NER1  
AJ272063 CAB89866 Q8NER1  
AJ277028 CAB95729 Q8NER1  
AL832420 CAH10646 Q9UHJ6 EC 2.7.1.14
AM393687 CAL38563    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SHPK NP_037408 M.musculus Shpk 74637 Gene Info NP_083307 88
R.norvegicus Shpk 287479   NP_001028854 86
C.elegans T25C8.1 188886   NP_499810 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)