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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TMTC2, Transmembrane and tetratricopeptide repeat containing 2
Sequence ID:NM_152588
Entrez Gene ID:160335
Ensembl ID:ENSG00000179104

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q21.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 83290216 - 83528069

 Exon Info From UCSC:
NM_152588

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939697Full LengthBC093852transmembrane and tetratricopeptide repeat containing 2
7939699Full LengthBC093854transmembrane and tetratricopeptide repeat containing 2
30924570IncompleteBC098572transmembrane and tetratricopeptide repeat containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689801  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152588 NP_689801 Q8N394 TPR_1
TPR_2
DUF1736

Related Sequences

 
mRNAGenPeptSwissProt
BC093852 AAH93852 Q8N394
BC093854 AAH93854 Q8N394
AK074634 BAC11102 Q8N394
AK315285 BAG37694 Q8N394
AK299771 BAH13125 B7Z639
AL834509 CAD39165 Q8N394
AX795392 CAE48265 Q8N394
AX795394 CAE48266  
AM393141 CAL38019  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TMTC2 NP_689801 M.musculus Tmtc2 278279 Gene Info NP_796342 96
R.norvegicus Tmtc2 299762   XP_235136 96
A.gambiae AgaP_AGAP009112 1280064   XP_319863 45
D.melanogaster CG4341 33276   NP_001097048 43
C.elegans F32D1.3 178832   NP_504200 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)