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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CFHR1, complement factor H-related 1
Sequence ID:NM_002113
RefSeqGene ID:NG_013060
Entrez Gene ID:3078
Ensembl ID:ENSG00000244414

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AGE-RELATED MACULOPATHYAPOE
C2
CFB
CFHR3
CX3CR1
HMCN1
PLEKHA1
PLEKHA1
TLR3
HEMOLYTIC UREMIC SYNDROME, ATYPICALCD46
CFH
CFHR3
CFI

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 196788870 - 196801189

NM_002113 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1172196788860196789031
173367196794606196794800
368544196795958196796134
545721196797199196797375
722904196799629196799811
9051294196800926196801315

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3934474Full LengthBC016755complement factor H-related 1
4712577Full LengthBC107771complement factor H-related 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002104  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002113 NP_002104 Q03591 Sushi

Related Sequences

 
mRNAGenPeptSwissProt
M65292 AAA35946 Q03591
M65293 AAA35947 Q03591
BC016755 AAH16755 Q03591
BC107771 AAI07772 Q03591
DQ892762 ABM83688  
DQ896007 ABM86991  
AK290830 BAF83519 Q03591
X56209 CAA39666 Q03591
X56210 CAA39667 Q6LBM9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CFHR1 NP_002104 R.norvegicus Cfhl1 289057   NP_001037692 65
M.musculus Cfhr1 50702 Gene Info NP_056595 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)