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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ARID4B, AT rich interactive domain 4B (RBP1-like)
Sequence ID:NM_001206794
NM_016374
NM_031371
RefSeqGene ID:NG_029484
Entrez Gene ID:51742
Ensembl ID:ENSG00000054267

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q42.1-q43Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 235330611 - 235490802

 Exon Info From UCSC:
NM_016374
NM_031371

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146449Full LengthBC130418AT rich interactive domain 4B (RBP1-like)
4592624IncompleteBC104632AT rich interactive domain 4B (RBP1-like)
4663973IncompleteBC017800AT rich interactive domain 4B (RBP1-like)
5014918IncompleteBC062536AT rich interactive domain 4B (RBP1-like)
5261610IncompleteBC048959AT rich interactive domain 4B (RBP1-like)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057458  NP_112739  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001206794 NP_001193723    
NM_016374 NP_057458 Q4LE39 ARID
RBB1NT
NM_031371 NP_112739   ARID
RBB1NT

Related Sequences

 
mRNAGenPeptSwissProt
AF083249 AAD41239 Q4LE39
AF208045 AAF23433 Q4LE39
AF214114 AAF28341 Q4LE39
AF227899 AAF36964 Q4LE39
BC017800 AAH17800 A0PJ81
BC048959 AAH48959 Q4LE39
BC062536 AAH62536 Q4LE39
BC104632 AAI04633 Q4LE39
BC130418 AAI30419 Q4LE39
AY220790 AAO63590 Q4LE39
AK023144 BAB14428 Q4LE39
AB210032 BAE06114 Q4LE39
AL133594 CAB63731 Q4LE39
BX648820 CAI46047 Q4LE39

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ARID4B NP_112739 R.norvegicus Arid4b 84481   NP_445873 89
M.musculus Arid4b 94246 Gene Info NP_919238 88
A.gambiae AgaP_AGAP007503 1269724   XP_001687911 38
D.melanogaster CG34422 32877   NP_573330 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)