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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TLR6, toll-like receptor 6
Sequence ID:NM_006068
RefSeqGene ID:NG_028087
Entrez Gene ID:10333
Ensembl ID:ENSG00000174130

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4p14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 38828407 - 38831160

NM_006068 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1858403882533538831157
584158963885838138858436

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40007924Full LengthBC111755toll-like receptor 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006059  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006068 NP_006059 Q9Y2C9 LRR_1
LRRCT
TIR

Related Sequences

 
mRNAGenPeptSwissProt
BC111755 AAI11756 Q2NKL3
AB020807 BAA78631 Q9Y2C9
AK313618 BAG36380 B2R933
AB445652 BAG55049 Q9Y2C9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TLR6 NP_006059 M.musculus Tlr6 21899 Gene Info NP_035734 74
R.norvegicus Tlr6 305353   NP_997487 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)