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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NLRC4, NLR family, CARD domain containing 4
Sequence ID:NM_001199138
NM_001199139
NM_021209
Entrez Gene ID:58484
Ensembl ID:ENSG00000091106

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2p22-p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 32449524 - 32490923

Transcript StartTranscript EndChromosomal Start Chromosomal End
223383244951732449833
3395063246046932460636
5075993246131532461407
6007703246320032463370
7718633246610132466193
86428583247467532476669
285931193247748732477747
312032383248184332481961
323933843249065532490800

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5179909Full LengthBC031555NLR family, CARD domain containing 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067032  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001199138 NP_001186067    
NM_001199139 NP_001186068    
NM_021209 NP_067032 Q9NPP4 CARD
NACHT

Related Sequences

 
mRNAGenPeptSwissProt
BC031555 AAH31555 Q9NPP4
AY027787 AAK14776 Q9NPP4
AY027788 AAK14777 Q9NPP4
AY027789 AAK14778 Q9NPP4
AY027790 AAK14779 Q9NPP4
AY032589 AAK38730 Q9NPP4
AF376061 AAK53443 Q9NPP4
AY035391 AAK59843 Q9NPP4
AY358152 AAQ88519 Q9NPP4
EU832226 ACE86796  
EU832133 ACE87483  
AK292673 BAF85362 Q9NPP4
AK314762 BAG37300 Q9NPP4
AK095467 BAG53062 Q9NPP4
AL389934 CAB97523 Q9NPP4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NLRC4 NP_001186067 M.musculus Nlrc4 268973 Gene Info NP_001028539 75
R.norvegicus Nlrc4 298784   NP_001100177 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)