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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC44A1, solute carrier family 44, member 1
Sequence ID:NM_022109
NM_080546
Entrez Gene ID:23446
Ensembl ID:ENSG00000070214

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q31.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 108006940 - 108152703


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5492167Full LengthBC049203solute carrier family 44, member 1
3882479IncompleteBC018213solute carrier family 44, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_536856  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_080546 NP_536856 Q8WWI5 DUF580

Related Sequences

 
mRNAGenPeptSwissProt
BC018213 AAH18213 Q8WWI5
BC049203 AAH49203 Q8WWI5
AK022549 BAG51089 B3KMS7
AK124926 BAG54114 B3KWF2
AJ272365 CAC82175 Q8WWI5
AJ420812 CAD12764 Q8WWI5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC44A1 NP_536856 M.musculus Slc44a1 100434 Gene Info NP_598652 96
R.norvegicus Slc44a1 85254   NP_001029024 96
A.gambiae CTLH1_ANOGA 1276904   XP_316311 40
D.melanogaster CG1311 38523   NP_647884 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)