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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MARCH5, membrane-associated ring finger (C3HC4) 5
Sequence ID:NM_017824
Entrez Gene ID:54708
Ensembl ID:ENSG00000198060

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23.32-q23.33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 94051163 - 94110999

NM_017824 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13679405091994051285
3685709407089194071093
5717019410042994100559
7028859410910594109288
88610529410942794109593
105339269411084794113720

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3905766Full LengthBC015480membrane-associated ring finger (C3HC4) 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060294  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017824 NP_060294 Q9NX47 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
BC015480 AAH15480 Q9NX47
JF432871 ADZ16088  
AK000452 BAA91173 Q9NX47
AB191202 BAF02285 Q9NX47
AK294799 BAG57919 B4DGV8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MARCH5 NP_060294 M.musculus March5 69104 Gene Info NP_081590 100
R.norvegicus March5 294079   NP_001099842 100
D.melanogaster CG9855 40556   NP_649463 55
A.gambiae AgaP_AGAP001041 1270534   XP_309240 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)